scikit-prox 0.0.4

A package for solving regularised optimisation problems in a scikit-learn style.

Scikit-Prox

The goal of this project is to implement a set of algorithms for solving the following optimization problem: minimize f(x) + g(x) where f is a smooth function and g is a proximal operator. The proximal operator of a function g is defined as: proxg(λx) = argmin y g(y) + 1/2λ‖y − x‖2

Installation

To install the package, run the following command: pip install scikit-prox

Usage

Example 1: Lasso

The following code solves the following optimization problem: minimize 1/2‖Ax − b‖2 + λ‖x‖1

import numpy as np
from scipy import sparse
from sklearn.datasets import make_regression
from sklearn.linear_model import Lasso
from skprox.linear_model import RegularisedLinearRegression

# Generate data
X, y = make_regression(n_samples=100, n_features=1000, random_state=0, noise=4.0, bias=100.0)
X = sparse.csr_matrix(X)

# Solve the problem using scikit-learn
model = Lasso(alpha=0.1)
model.fit(X, y)
print("scikit-learn solution: {}".format(model.coef_))

# Solve the problem using scikit-prox
model = RegularisedLinearRegression(proximal='L1', sigma=0.1)
model.fit(X, y)
print("scikit-prox solution: {}".format(model.coef_))

Example 2: Total Variation Regression

The following code solves the following optimization problem: minimize 1/2‖Ax − b‖2 + λ‖∇x‖1

import numpy as np
from scipy import sparse
from sklearn.datasets import make_regression
from skprox.linear_model import RegularisedLinearRegression

# Generate data
X, y = make_regression(n_samples=100, n_features=1000, random_state=0, noise=4.0, bias=100.0)
X = sparse.csr_matrix(X)

# Solve the problem using scikit-prox
model = RegularisedLinearRegression(proximal='TV', sigma=0.1)
model.fit(X, y)
print("scikit-prox solution: {}".format(model.coef_))

Example 3: Grid Search

The following code solves the following optimization problem: minimize 1/2‖Ax − b‖2 + λ‖x‖1

import numpy as np
from scipy import sparse
from sklearn.datasets import make_regression
from sklearn.linear_model import Lasso
from skprox.linear_model import RegularisedLinearRegression
from sklearn.model_selection import GridSearchCV

# Generate data
X, y = make_regression(n_samples=100, n_features=1000, random_state=0, noise=4.0, bias=100.0)
X = sparse.csr_matrix(X)

# Solve the problem using scikit-learn
model = Lasso()
grid = GridSearchCV(model, {'alpha': [0.1, 0.2, 0.3]})
grid.fit(X, y)
print("scikit-learn solution: {}".format(grid.best_estimator_.coef_))

# Solve the problem using scikit-prox
model = RegularisedLinearRegression(proximal='L1')
grid = GridSearchCV(model, {'sigma': [0.1, 0.2, 0.3]})
grid.fit(X, y)
print("scikit-prox solution: {}".format(grid.best_estimator_.coef_))

Documentation

The documentation is available at https://scikit-prox.readthedocs.io/en/latest/

License

This project is licensed under the MIT License - see the LICENSE.md file for details

Acknowledgments

This project leans on the pyproximal package borrowing all the proximal operators except for Total Variation which is implemented using functions from skimage.