Scalable Cytometry Image Processing (SCIP) is an open-source tool that implements an image
Project description
SCIP: Scalable Cytometry Image Processing
Scalable Cytometry Image Processing (SCIP) is an open-source tool that implements an image processing pipeline on top of Dask, a distributed computing framework written in Python. SCIP performs normalization, image segmentation and masking, and feature extraction.
Check the docs for installation and usage instructions.
Development
Generating documentation
cd docs
rm -r source/generated/
sphinx-apidoc -f -T -o source/generated/ ../src/scip
make clean
make html
Generate release changelog
git log v{previous version tag}..HEAD --oneline | xclip -sel clip
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
scip-0.1.11.post4.tar.gz
(58.3 kB
view details)
Built Distribution
File details
Details for the file scip-0.1.11.post4.tar.gz.
File metadata
- Download URL: scip-0.1.11.post4.tar.gz
- Upload date:
- Size: 58.3 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/4.0.1 CPython/3.9.10
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 0e06e1fe500da82caa427b2cc065e4400ce5cb6c06ae2991ead33c5d3c2ecc5d |
|
| MD5 | 146ea567fcc6e60985b6d3382697a029 |
|
| BLAKE2b-256 | c8ab2edf7d09419fdfe26f2f35f50951fb145ba64d1b4ee0f7d9afe245ad1f3b |
File details
Details for the file scip-0.1.11.post4-py3-none-any.whl.
File metadata
- Download URL: scip-0.1.11.post4-py3-none-any.whl
- Upload date:
- Size: 58.2 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/4.0.1 CPython/3.9.10
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 2b58c64cebe41eda0157fed436b6459b920c26b9a41e29ae687f09de4658123a |
|
| MD5 | edf346b623f312fa98a403ccfac8d507 |
|
| BLAKE2b-256 | 58db5852a6da45eab6cd15bd9c7f6ee14319396535eede42805d75d2c2cad289 |
