SHAP-based Microbiome Analyses Tool
Project description
SHAP-based Mircrobiome Analysis Tool (SHAPMAT)
Leveraging Explainable AI for Microbiome Data Analysis
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About The Project
SHAPMAT leverages SHAP (SHapley Additive exPlanations) for microbiome data analyese that includes local explanation-based feature importance analysis and phenotype subytping/clustering.
Getting Started
This is an example of how you may give instructions on setting up your project locally. To get a local copy up and running follow these simple example steps.
Prerequisites
Please check the requirements.txt file for the required dependencies.
Installation
Use pip to install this library:
pip install shapmat
License
Distributed under the MIT License. See LICENSE.txt for more information.
Contact
Ryza Rynazal - Email
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