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Object oriented raw read typing software

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[![Build Status](https://travis-ci.org/OLC-Bioinformatics/sipprverse.svg?branch=master)](https://travis-ci.org/OLC-Bioinformatics/sipprverse)

# sipprverse


#### [Read the Docs](http://olc-bioinformatics.github.io/sipprverse/)

### Introduction

This pipeline searches for gene targets in FASTQ files. These files may be previously generated, or created from BCL files from a run of an Illumina MiSeq as part of the pipeline. The latter functionality is to allow for the creation of FASTQ files from an in progress MiSeq run.

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