Sixgill
Six-frame Genome-Inferred Libraries for LC-MS/MS
What is Sixgill?
Sixgill is a tool for using shotgun metagenomics sequencing reads to construct databases of ‘metapeptides’: short protein fragments for database search of LC-MS/MS metaproteomics data. A comprehensive set of resources for building and using metapeptide databases is here.
Required Python versions
Sixgill supports Python 2.7
Project dependencies
Sixgill uses the following python packages:
Installation
Get pip, if you don’t have it yet.
Install Sixgill and its dependencies:
pip install biopython pysam sixgill
Documentation
The Sixgill wiki contains more detailed information on using Sixgill.
1 maintainer
Metadata
1 maintainer
Release files for sixgill 0.2.4
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| sixgill-0.2.4.tar.gz | 12.6 kB | Without provenance | Details for sixgill-0.2.4.tar.gz |
Release files / sixgill-0.2.4.tar.gz
| Download URL | sixgill-0.2.4.tar.gz |
|---|---|
| Size | 12.6 kB |
| Tags | Source |
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Security for sixgill 0.2.4
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