snakemake-logger-plugin-spectio
A Snakemake logger plugin for Spectio, the tool that launches, monitors and steers Nextflow and Snakemake runs.
This early 0.0.0 release writes every Snakemake log event as one JSON line to a file (--logger-spectio-file, default spectio-events.jsonl, created 0600, never through a symlink), so another program can follow a run:
pip install snakemake-logger-plugin-spectio
snakemake --cores 1 --logger spectio --logger-spectio-file events.jsonl
Each line holds the time, the level, the event name (job_info, job_finished, error…), the message and the event's own fields (rule name, job ID…). The full Spectio bridge comes with Spectio's first release.
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Release files for snakemake-logger-plugin-spectio 0.0.0
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| File | Size | Uploaded | Provenance | Actions |
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| snakemake_logger_plugin_spectio-0.0.0.tar.gz | 2.1 kB | With provenance | Details for snakemake_logger_plugin_spectio-0.0.0.tar.gz |
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| snakemake_logger_plugin_spectio-0.0.0-py3-none-any.whl | Python 3 | none | any | Details for snakemake_logger_plugin_spectio-0.0.0-py3-none-any.whl |
Total release size: 5.2 kB
Release files / snakemake_logger_plugin_spectio-0.0.0.tar.gz
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| Tags | Python 3 |
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