NGS pipelines bootstrapper
Project description
NGS pipelines bootstrapper
Installation
You can install the latest stable version from PyPI
$ pip install solida
Prerequisites
To run Solida, you need Conda. To install it, see conda.io
Usage
To check version:
$ solida -v
To list all the pipelines enabled, digit
$ solida list
$ solida list --full
To check if both pipeline and profile are available, digit:
$ solida pipeline -l pipeline_label -p profile_label
Before to deploy a pipeline, you have to create a project profile:
$ solida pipeline -l pipeline_label -p profile_label --create-profile
Solida will create a yaml file named profile_label.yaml into ~/solida_profiles.
Edit the profile_label.yaml to match your environment settings.
After that, deploy the pipeline with:
$ solida pipeline -l pipeline_label -p profile_label --deploy
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distributions
No source distribution files available for this release.See tutorial on generating distribution archives.
Built Distribution
solida-0.6.0-py2.py3-none-any.whl
(15.7 kB
view hashes)
Close
Hashes for solida-0.6.0-py2.py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | b6a0759db43feca49438493c2736e2952aafbb02b1f5bccb07b14e6fe77ba035 |
|
MD5 | e9dbd829897ed34054d6e4cefeb346dd |
|
BLAKE2b-256 | f1452dec1fc0bdd97876480cbb48d058b9907143c0c43741e84bad1be9d7b47c |