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A torch implementation of the Recurrent Inference Machine

Project description

https://badge.fury.io/py/torch-rim.svg https://codecov.io/gh/AlexandreAdam/torch_rim/branch/master/graph/badge.svg

This is an implementation of a Recurrent Inference Machine (see Putzky & Welling (2017)) alongside some standard neural network architectures for the type of problem RIM can solve.

Installation

To install the package, you can use pip:

pip install torch-rim

Usage

from torch_rim import RIM, Hourglass, Unet
from torch.func import vmap

# B is the batch size
# C is the input channels
# dimensions are the spatial dimensions (e.g. [28, 28] for MNIST)

# Create a score_fn, e.g. a Gaussian likelihood score function
@vmap
def score_fn(x, y, A, Sigma): # must respect the signature (x, y, *args)
    # A is a linear forward model, Sigma is the noise covariance
    return (y - A @ x) @ Sigma.inverse() @ A

# ... or a Gaussian energy function (unnormalized log probability)
@vmap
def energy_fn(x, y, F, Sigma):
    # F is a general forward model
    return (y - F(x)) @ Sigma.inverse() @ (y - F(x))

# Create a RIM instance with the Hourglass neural network back-bone and the score function
net = Hourglass(C, dimensions=len(dimensions))
rim = RIM(dimensions, net, score_fn=score_fn)

# ... or with the energy function
rim = RIM(dimensions, net, energy_fn=energy_fn)

# Train the rim, and save its weight in checkpoints_directory
rim.fit(dataset, epochs=100, learning_rate=1e-4, checkpoints_directory=checkpoints_directory)

# Make a prediction on an observation y
x_hat = rim.predict(y, A, Sigma) # of with the signature (y, F, Sigma) with the energy_fn

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