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The first software for quantitative trajectory inference

Project description

Treefit for Python - The first software for quantitative trajectory inference

This is an implementation of Treefit in Python.

Treefit is a novel data analysis toolkit that helps you perform two types of analysis: 1) checking the goodness-of-fit of tree models to your single-cell gene expression data; and 2) deciding which tree best fits your data.


pip install treefit


The main functions are treefit.treefit() and treefit.plot():


See for details.

Project details

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