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A package to rate motion artifacts in medical images.

Project description

Installation

pip install tse-motion

CLI

rate-motion sub-003_ses_01_acq_hipp_T2w.nii.gz

Input: sub-003_ses-01_acq-hipp_T2w.nii.gz | Motion Rating: 4.0

Python

from tse_rating.artifact_rating import rate
img = nib.load('tse.nii.gz').get_fdata()
score = rate_motion_artifact(img)

score, grad_cam = rate_motion_artifact(img, save_gradcam=True)

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