No project description provided
Project description
Vivarium-COBRA
A vivarium wrapper process for the COBRApy library.
COBRA_FBA can be loaded with BiGG models, and has been primarily used with BiGG model iAF1260b.
The project includes CobraComposite, which adds auxiliary processes MassDeriver and VolumeDeriver
to make a type of dynamic FBA. Other processes can constrain individual fluxes in COBRA_FBA through
the flux_bounds port, allowing for a type of integrative FBA.
Installation
$ pip install -r requirements.txt
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
vivarium-cobra-0.0.18.tar.gz
(396.4 kB
view details)
File details
Details for the file vivarium-cobra-0.0.18.tar.gz.
File metadata
- Download URL: vivarium-cobra-0.0.18.tar.gz
- Upload date:
- Size: 396.4 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.4.2 importlib_metadata/4.7.1 pkginfo/1.7.1 requests/2.26.0 requests-toolbelt/0.9.1 tqdm/4.62.2 CPython/3.9.6
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
f0876c073427f29c37e7e4665bf38346998ad3e36461050792ad7e99a66b91e3
|
|
| MD5 |
d86314ce539316bc7c1043736f8c1735
|
|
| BLAKE2b-256 |
d2adb466069a9b53f4faa12b1b7b43109b4ea912e6930e8067bdecf1744d0e0f
|
