webgestaltpy 0.1.0

No project description provided

WebGestaltPy

A python package containing bindings to the underlying Rust library webgestalt_rust.

Features

• Compute GSEA, ORA, and NTA
• Run a meta-analysis combining multiple lists
• Combine multiple lists into a single analysis type

The output of the python package is the values. This does not generate any HTML reports. For reports, please use the R package.

Installation

WebGestaltPy uses maturin and rye to build the full project. To build WebGestaltPy, run the following commands

rye sync # download correct python version and install dependencies
rye tools install maturin
rye run python -m ensurepip --default-pip # makes sure maturin can run correctly
rye shell # initialize shell so the python command executes the local version
maturin develop # -r # add -r to build the full release version of the rust library.
python test.py # run the test script