Working with wiggle tracks in Python
Wiggelen is a Python library for working with wiggle tracks (WIG files). It also provides a command line interface to some of its functionality.
The main goal of Wiggelen is to provide light-weight and unified access to wiggle tracks.
>>> import wiggelen >>> for x in wiggelen.walk(open('test.wig')): ... print 'chr%s:%d\t%s' % x ... chr18:34344 629.0 chr18:34345 649.0 chr18:34446 657.0 chrM:308 520.0 chrM:309 519.0
To install the latest release via PyPI using pip:
pip install wiggelen
The latest documentation with user guide and API reference is hosted at Read The Docs.
You can also compile the documentation directly from the source code by running make html from the doc/ subdirectory. This requires Sphinx to be installed.
Wiggelen is licensed under the MIT License, see the LICENSE file for details. See the AUTHORS file for a list of authors.
Release history Release notifications | RSS feed
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
|Filename, size||File type||Python version||Upload date||Hashes|
|Filename, size wiggelen-0.4.1.tar.gz (22.1 kB)||File type Source||Python version None||Upload date||Hashes View|