DBGen is a python package providing a general purpose database to support genomic data analysis studies.
The current implementation is based on mongoDB.
Quick start
You can install DBGen along with all its dependencies from PyPI:
$ pip install -r requirements.txt dbgenSource
The source code and minimal working examples can be found on GitHub.
Documentation
Documentation for the latest stable version is available on ReadTheDocs.
Running tests
You can run all unittests from command line by using python:
$ python -m unittest discoveror coverage:
$ coverage run -m unittest discoverContributing
Please read the contributing section for details on our code of conduct, and the process for submitting pull requests to us.
Licence
Copyright 2020 Pietro Barbiero.
Licensed under the Apache License, Version 2.0 (the “License”); you may not use this file except in compliance with the License. You may obtain a copy of the License at: http://www.apache.org/licenses/LICENSE-2.0.
Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an “AS IS” BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and limitations under the License.
1 maintainer
Metadata
1 maintainer
Release files for dbgen 0.0.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| dbgen-0.0.0.tar.gz | 10.3 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| dbgen-0.0.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 27.6 kB
Release files / dbgen-0.0.0.tar.gz
| Download URL | dbgen-0.0.0.tar.gz |
|---|---|
| Size | 10.3 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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twine/1.13.0 pkginfo/1.4.2 requests/2.21.0 setuptools/41.1.0 requests-toolbelt/0.8.0 tqdm/4.30.0 CPython/3.7.5
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Release files / dbgen-0.0.0-py3-none-any.whl
| Download URL | dbgen-0.0.0-py3-none-any.whl |
|---|---|
| Size | 17.3 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/1.13.0 pkginfo/1.4.2 requests/2.21.0 setuptools/41.1.0 requests-toolbelt/0.8.0 tqdm/4.30.0 CPython/3.7.5
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