Skip to main content

fgbio_postprocessing

https://img.shields.io/pypi/v/fgbio_postprocessing.svg https://img.shields.io/travis/ionox0/fgbio_postprocessing.svg Documentation Status

Usage: simplex_filter [OPTIONS]

Filter bam file to only simplex reads with min_simplex_reads on one strand

Options:
--input_bam TEXT

Path to bam to be filtered [required]

--output_filename TEXT

Name of output bam [required]

--min_simplex_reads INTEGER

Minimum number of simplex reads to pass filter

--help

Show this message and exit.

Credits

This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.

History

0.1.0 (2020-08-25)

  • First release on PyPI.

Metadata

Release files for fgbio-postprocessing 0.1.8

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for fgbio-postprocessing 0.1.8
File Size Uploaded Provenance
fgbio_postprocessing-0.1.8.tar.gz 9.0 kB Without provenance Details

Built distribution (wheel)

Table of built distributions (wheels) for fgbio-postprocessing 0.1.8
File Interpreter ABI Platform
fgbio_postprocessing-0.1.8-py2.py3-none-any.whl Python 2, Python 3 none any Details

Total release size: 13.7 kB

Release files / fgbio_postprocessing-0.1.8.tar.gz

Download URL fgbio_postprocessing-0.1.8.tar.gz
Size 9.0 kB
Tags Source
SHA-256 checksum
How to use checksums
7520b9375dc7033e2e529d5bb6367a4590f64925c3a37deb25b7d7ad8a414e92
BLAKE2b-256 checksum
How to use checksums
a58f4e47ebf99fc84ac885434e3aab6f91e8239683bca913e45826c7b43f6c9d
Upload date
Uploaded using Trusted Publishing?
What is trusted publishing?
No
Uploaded via twine/1.12.1 pkginfo/1.5.0.1 requests/2.18.4 setuptools/47.1.1 requests-toolbelt/0.9.1 tqdm/4.46.1 CPython/3.7.6

Release files / fgbio_postprocessing-0.1.8-py2.py3-none-any.whl

Download URL fgbio_postprocessing-0.1.8-py2.py3-none-any.whl
Size 4.7 kB
Tags Python 2 Python 3
SHA-256 checksum
How to use checksums
21d0bf2df98ac907572007b089fa54c7342e0ba73c6e14dc2c2c7c92336dc221
BLAKE2b-256 checksum
How to use checksums
66d15ef4fbd5e1a3c2705e2ae2b3c0eac8e4b6d2251a0989c9483bc4ee8434aa
Upload date
Uploaded using Trusted Publishing?
What is trusted publishing?
No
Uploaded via twine/1.12.1 pkginfo/1.5.0.1 requests/2.18.4 setuptools/47.1.1 requests-toolbelt/0.9.1 tqdm/4.46.1 CPython/3.7.6

Security for fgbio-postprocessing 0.1.8

Provenance

Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.

No provenance found

None of the files in this release were uploaded with provenance metadata.

A note on package security

PyPI is a repository for distributing packages, not a service for auditing them. While third-party security researchers and our staff do their best to detect and remove malicious packages, PyPI cannot guarantee the quality, security or suitability of any given package.

To learn more about protecting yourself from malicious actors, visit our package security documentation.

Anthropic, PBC Visionary sponsor Bloomberg Visionary sponsor Hudson River Trading Visionary sponsor Meta Visionary sponsor NVIDIA Visionary sponsor Microsoft Sustainability sponsor Depot Continuous Integration AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Sentry Error logging StatusPage Status page