4 projects
v-MOSES
Motion Sensing Superpixels (MOSES): a computational framework for quantifying single-cell and collective motion phenotypes from time-lapse microscopy
v-TimeLKFlow
Time-varying Liang-Kleeman information flow methods, including the mtvlk (multivariate, Zhou et al. 2024) implementation
v-InfoTrace
Calculate multiscale pixel spatiotemporal information flow for 2D videos
SAM-SPOT
Shape, appearance, motion Phenotype Observation Tool for streamlined live-cell phenotyping temporal analysis