17 projects
bio_tools_app
The bio_tools command-line application, as a prebuilt binary. Install, run, and inspect computational biology and chemistry tools, e.g. AlphaFold, Boltz, RFdiffusion, and ProteinMPNN
athanor_bio_tools
Install, run, and inspect computational biology and chemistry tools, e.g. AlphaFold, Boltz, RFdiffusion, and ProteinMPNN
biology-files
Save and load common biology file formats
mol-dynamics
Run GPU and SIMD-accelerated molecular dynamics simulations
ewald
Ewald SPME force calculations
mcubes
The Marching Cubes algorithm for creating isosurfaces
na-seq
DNA, RNA, and amino acid sequence types and functions
fplot
Plot functions with simple syntax
pyflow
A modern Python installation and dependency manager
anyleaf
Driver for the Anyleaf pH sensor
pyhat
Modern Python for locked-down RHEL
pflow
A modern Python installation and dependency manager
siunits
Perform operations on SI units
scinot
Display numbers in scientific notation.
Saturn
Simple functions for tz-aware datetimes.
scipy-stack
Helper to install the SciPy stack
brisk
Fast implementation of numerical functions using Numba
