13 projects
alyx-registrator
Utilitaries to easily register files to an alyx-database/ONE environment.
suite2p-haisslab
Pipeline for calcium imaging
one-haisslab
Alyx Connector, based on the Open Neurophysiology Environment
treat2p
Treatment pipeline for suite2p extracted fluorescent traces over time.
easimage
Image and video management for research use, in an unified easy to use API
inflow-haisslab
General python code for analysis pipeline
alyx-local
Local database for experimental neuroscience laboratories
alyx-connector
Alyx Connector, based on the Open Neurophysiology Environment
processing-pypelines
Framework to organize processing code outputs to/from disk, processing chaining and versionning with a common easy to use api
timelined_array
Manage easily 1 or multidimensionnal samples numpy arrays that are time related. Extends numpy without removing any of it's abilities on such arrays.
alyx-setup-utils
Set of python utilitary tools acessible through URI REST requests, to link various setup's session configs from alyx session infos.
foldermerge
Default template for PDM package
auto-fast-docs
Automatic code documentation generation tool (to generate markdown files compatible with mkdocstrings)
