13 projects
alyx-local
Local database for experimental neuroscience laboratories
treat2p
Treatment pipeline for suite2p extracted fluorescent traces over time.
suite2p-haisslab
Pipeline for calcium imaging
inflow-haisslab
General python code for analysis pipeline
alyx-connector
Alyx Connector, based on the Open Neurophysiology Environment
processing-pypelines
Framework to organize processing code outputs to/from disk, processing chaining and versionning with a common easy to use api
easimage
Image and video management for research use, in an unified easy to use API
one-haisslab
Alyx Connector, based on the Open Neurophysiology Environment
timelined_array
Manage easily 1 or multidimensionnal samples numpy arrays that are time related. Extends numpy without removing any of it's abilities on such arrays.
alyx-registrator
Utilitaries to easily register files to an alyx-database/ONE environment.
alyx-setup-utils
Set of python utilitary tools acessible through URI REST requests, to link various setup's session configs from alyx session infos.
foldermerge
Default template for PDM package
auto-fast-docs
Automatic code documentation generation tool (to generate markdown files compatible with mkdocstrings)
