9 projects
picked-group-fdr
Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments
triqler
Triqler: TRansparent Identification-Quantification-Linked Error Rates
topas-pipeline
Automated (phospho)proteomics processing pipeline for large patient cohorts providing cohort as well as patient-specific insights.
psite-annotation
Module for annotating p-sites based on resources such as PhosphoSitePlus
icorr
Identity Correlation Value to measure how identical two arrays X and Y are and how likely this similarity is by random chance.
simsi-transfer
Software-assisted reduction of missing values in phosphoproteomics and proteomics isobaric labeling data using MS2 spectrum clustering
curve_curator
CurveCurator is an open-source analysis platform for any dose-dependent data. It fits a classical 4-parameter equation to estimate effect potency, effect size, and the statistical significance of the observed response. 2D-thresholding efficiently reduces false positives in high-throughput experiments and separates relevant from irrelevant or insignificant hits in an automated and unbiased manner. An interactive dashboard allows users to quickly explore data locally.
job-pool
Enhanced Job Pool for Python Multiprocessing
simsalabim
Simple Interface for MS Applications
