8 projects
piaso-tools
Precise Integrative Analysis of Single-cell Omics.
cytome
Single-file multi-omics data format for single-cell biology
cosg
Accurate and fast cell marker gene identification with COSG (with optional GPU acceleration)
preprint-fulltext
CLI + MCP toolkit that retrieves full text of bioRxiv/medRxiv/arXiv preprints as structured sections — grounding LLM/agent scientific reasoning and deep research — and builds embedding-ready corpora.
piaso-mcp
Local stdio MCP server for the PIASO single-cell omics ecosystem — serves knowledge and public data (PIASOmarkerDB via the live piaso.org API), never compute or user data.
stato
Capture, validate, and transfer AI agent expertise.
laris
LARIS enables accurate and efficient ligand and receptor interaction analysis in spatial transcriptomics
emergene
EMERGENE for individual cell-based differential transcriptomic analysis across conditions.
