6 projects
hapla
Framework for haplotype clustering in phased genotype data
fastmixture
Fast Ancestry Estimation
emu-popgen
EM-PCA for inferring population structure in the presence of missingness
pcangsd
Framework for analyzing low depth NGS data in heterogeneous populations using PCA
projectionSVD
Projection into SVD space for genetic data
halkoSVD
Fast Python/Cython implementation of the PCAone Halko algorithm
