3 projects
SpatialQuery
Spatial query tools for analyzing spatial transcriptomics data
scCausalVI
A deep causality-aware model for disentangling treatment effects at single-cell resolution for perturbational scRNA-seq data
scfind
scfind is a method for searching specific cell types from large single-cell datasets by a query of gene list. scfind can suggest subqueries score by TF-IDF method. scfind can perform hypergeometric test which allows the evaluation of marker genes specific to each cell type within a dataset.
