20 projects
MEAutility
Python package for multi-electrode array (MEA) handling and stimulation.
spikeinterface
Python toolkit for analysis, visualization, and comparison of spike sorting output
probeinterface
Python package to handle probe layout, geometry and wiring to device.
neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats
MEArec
Python toolkit for biophysical simulation of extracellular electrophysiology recordings
spikeinterface-gui
Qt GUI for spikeinterface
spikeinterface-pipelines
Collection of standardized analysis pipelines based on SpikeInterfacee.
pyopenephys
Python package for parsing Open Ephys data.
ndx-probeinterface
Extension for defining neural probes in the probeinterface format
spikeextractors
Python module for extracting recorded and spike sorted extracellular data from different file types and formats
axon-velocity
Python package to reconstruct axonal branches from high-density micro-electrode array data
spiketoolkit
Python toolkit for analysis, visualization, and comparison of spike sorting output
neuroplotlib
Python package for visualization of neurons in LFPy.
spikewidgets
Python widgets for spike sorting and electrophysiology
spikecomparison
Python toolkit for analysis, visualization, and comparison of spike sorting output
spikesorters
Python wrappers for popular spike sorters
spikemetrics
Python toolkit for computing spike sorting metrics
spikefeatures
Python toolkit for computing extracellular waveforms features
pyintan
Python package for parsing INTAN data.
klustakwik2
Clustering for high dimensional neural data
