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  cgcloud_jenkins

  Joined on Aug 6, 2015

17 projects

toil-vg

Last released on Dec 21, 2018

UC Santa Cruz Computational Genomics Lab's Toil-based VG pipeline

toil-rnaseq

Last released on Dec 6, 2018

UC Santa Cruz Computational Genomics Lab's Toil-based RNA-seq workflow

toil

Last released on Oct 2, 2018

Pipeline management software for clusters.

protect

Last released on May 26, 2018

Prediction of T-Cell Epitopes for Cancer Therapy

bd2k-python-lib

Last released on May 3, 2018

The BD2K Python module kitchen sink

toil-lib

Last released on Apr 26, 2017

A common library for functions and tools used in toil-based pipelines

s3am

Last released on Mar 23, 2017

Efficiently transfer large amounts of data to S3

toil-scripts

Last released on Dec 2, 2016

A repository of genomic workflows developed by the UCSC Computational Genomics lab

cgcloud-toil

Last released on Nov 22, 2016

Setup and manage a toil and Apache Mesos cluster in EC2

cgcloud-mesos-tools

Last released on Nov 22, 2016

Setup and manage an Apache Mesos cluster in EC2

cgcloud-mesos

Last released on Nov 22, 2016

Setup and manage a Apache Mesos cluster in EC2

cgcloud-spark-tools

Last released on Nov 22, 2016

Setup and manage a Apache Spark cluster in EC2

cgcloud-spark

Last released on Nov 22, 2016

Setup and manage a Apache Spark cluster in EC2

cgcloud-jenkins

Last released on Nov 22, 2016

Setup and manage a Jenkins continuous integration cluster in EC2

cgcloud-agent

Last released on Nov 22, 2016

Management of ~/.ssh/authorized_keys for a fleet of EC2 instances

cgcloud-core

Last released on Nov 22, 2016

Efficient and reproducible software deployment for EC2 instances

cgcloud-lib

Last released on Nov 22, 2016

Components shared between cgcloud-core and cgcloud-agent

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