10 projects
trackhub
Create and manage UCSC track hubs from Python
gffutils
Work with GFF and GTF files in a flexible database framework
pybedtools
Wrapper around BEDTools for bioinformatics work
termseq-peaks
hubward
Manage the visualization of large amounts of other people's [often messy] genomics data
metaseq
Integrative analysis of high-thoughput sequencing data
sphinxleash
Lightweight framework for generating Sphinx docs
ucscsession
ucscsession description
encode-dataframe
Convert UCSC's ENCODE metadata into pandas DataFrames
biomartpy
Simple interface for accessing biomaRt from Python (via rpy2 and pandas)