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Username    dcdanko
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43 projects

pangea-api

Last released

cap2

Last released

CAP2

gimmebio.sample_seqs

Last released

metagenscope

Last released

gimmebio.data_manager

Last released

gimmebio.cli

Last released

gimmebio.pangea

Last released

gimmebio.covid

Last released

ModuleUltra

Last released

Tools to make pipelines easier to run and distribute for large biological datasets

DataSuper

Last released

Organization for scientific projects.

gimmebio

Last released

Utilities and explorations in computational biology

gimmebio.seqs

Last released

gimmebio.stat_strains

Last released

capalyzer

Last released

Parsing functionality for the metasub CAP

microbe_directory

Last released

Codes for Microbe Directory 2.0 and above

metasub_utils.packet_parse

Last released

metasub_utils.hudson_alpha

Last released

gimmebio.kmers

Last released

gimmebio.assembly

Last released

gimmebio.entropy_scores

Last released

gimmebio.ram_seq

Last released

metasub_utils.wasabi

Last released

urban_metagenomics_tutorial

Last released

Metagenomics utilities

metasub_utils.metadata

Last released

metasub_utils

Last released

Utility functions for the MetaSUB Consortium

minerva_deconvolve

Last released

Algorithm for deconvolving and clustering barcoded short reads

metasub_utils.data_packet

Last released

gimmebio.pji

Last released

gimmebio.seqtalk

Last released

gimmebio.hiveplots

Last released

gimmebio.linked_reads

Last released

llps

Last released

A simple specification for large bioinformatics projects.

gimmebio.text_plots

Last released

gimmebio.taxa_ags_normalizer

Last released

PackageMega

Last released

Simple package manager to download and keep track of biological databases.

yaml_backed_structs

Last released

Basic python data structures backed by a human editable yaml file

metasub_utils.zurich

Last released

metasub_utils.metagenscope

Last released

metasub_utils.bridges

Last released

metasub_utils.athena

Last released

dockerswabber

Last released

Small CLI to automate management of Docker hub image tags.

gimme_input

Last released

A library of useful functions to get input from users for command line programs.

py_archy

Last released

Implementation of the popular node-archy tool in python

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