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Username    dcdanko
Date joined   Joined on

43 projects

pangea_api

Last released on

gimmebio.data_manager

Last released on

gimmebio.cli

Last released on

gimmebio.pangea

Last released on

cap2

Last released on

CAP2

metagenscope

Last released on

gimmebio.covid

Last released on

ModuleUltra

Last released on

Tools to make pipelines easier to run and distribute for large biological datasets

DataSuper

Last released on

Organization for scientific projects.

gimmebio

Last released on

Utilities and explorations in computational biology

gimmebio.seqs

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gimmebio.stat_strains

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capalyzer

Last released on

Parsing functionality for the metasub CAP

microbe_directory

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Codes for Microbe Directory 2.0 and above

metasub_utils.packet_parse

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metasub_utils.hudson_alpha

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gimmebio.sample_seqs

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gimmebio.kmers

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gimmebio.assembly

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gimmebio.entropy_scores

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gimmebio.ram_seq

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metasub_utils.wasabi

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urban_metagenomics_tutorial

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Metagenomics utilities

metasub_utils.metadata

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metasub_utils

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Utility functions for the MetaSUB Consortium

minerva_deconvolve

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Algorithm for deconvolving and clustering barcoded short reads

metasub_utils.data_packet

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gimmebio.pji

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gimmebio.seqtalk

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gimmebio.hiveplots

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gimmebio.linked_reads

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llps

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A simple specification for large bioinformatics projects.

gimmebio.text_plots

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gimmebio.taxa_ags_normalizer

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PackageMega

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Simple package manager to download and keep track of biological databases.

yaml_backed_structs

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Basic python data structures backed by a human editable yaml file

metasub_utils.zurich

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metasub_utils.metagenscope

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metasub_utils.bridges

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metasub_utils.athena

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dockerswabber

Last released on

Small CLI to automate management of Docker hub image tags.

gimme_input

Last released on

A library of useful functions to get input from users for command line programs.

py_archy

Last released on

Implementation of the popular node-archy tool in python

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