18 projects
yunta
Predicting protein-protein interactions and structures from multiple sequence alignments.
duvidnn
Deep learning with uncertainty for general purpose, chemistry, and taxonomic tasks.
bartab
Analysis of barcoded, pooled functional genomics assays.
crispio
Designing CRISPR-Cas guide RNAs in bacteria.
streq
Basic utilities for working with nucleotide sequence strings.
bioino
Lightweight IO and conversion for bioinformatics file formats.
aspect-data
General purpose, chemistry, and taxonomic featurization of tabular data with caching.
eluent
Chemistry-aware splitting of large datasets.
carabiner-tools
Useful utilities.
vectome
Deterministic vectorization of genomes.
schemist
Organizing and processing tables of chemical structures.
duvida
Calculating exact and approximate confidence and information metrics for differentiable functions.
lchemme
Training and applying large chemistry models for embeddings.
ogilo-array
Automated construction of oligo library sequences for oligo array synthesis.
monte-barcode
Generating sets of random DNA sequences optimized for use in high-throughput sequencing.
hts-tools
Parsing and analysing platereader absorbance and fluorescence data.
rf2t-micro
Stripped-down RosettaFold-2track.
nemony
Convert text to adjective-noun mnemonics.
