Pathway analysis tools by eQuilibrator
Calculation of standard thermodynamic potentials of biochemical reactions.
Parameter balancing of metabolic models in systems biology
Light adapter classes around Open Babel, RDKit, and ChemAxon for the functionality needed in eQulibrator.
Generate cache assets from MetaNetX content.
Cache application for compounds, reactions, and enzymes
Standard reaction Gibbs energy estimation for biochemical reactions.
OptSlope - A tool for metabolic engineering, based on the OptSlope algorithm
Enzyme Cost Minimization - a package for calculating the minimal enzyme cost of a metabolic pathway