8 projects
hybracter
An automated long-read first bacterial genome assembly pipeline.
dnaapler
Reorients assembled microbial sequences
pholdlib
Shared ProstT5 inference library for phold and baktfold
baktfold
Rapid and standardized annotation of bacterial genomes, MAGs and plasmids using protein structural information
phold
Phage Annotations using Protein Structures
pharokka
Fast phage annotation tool
plassembler
Quickly and accurately assemble plasmids in hybrid sequenced bacterial isolates
pypolca
Standalone Python implementation of the POLCA polisher from MaSuRCA
