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Username    mashbudn

22 projects

SeedWaterSegmenter

Last released

graphical program to interactively segment image stacks of cells in tissue with edge-labels (aka. white outlines)

FilenameSort

Last released

utility to aid in natural or "human-like" sorting of file names

ImageContour

Last released

construct and use linear paths around simply-connected binary and greyscale images

np-utils

Last released

collection of utilities for array and list manipulation

simple-metrics-manager

Last released

Just a simple system to manage a set of metrics (string name / function / returned data) that supports caching (memory and disk)

irt-parameter-estimation

Last released

Parameter estimation routines for logistic Item Characteristic Curves (ICC) from Item Response Theory (IRT)

wxPyGameVideoPlayer

Last released

Just a simple video player using wxPython, PyGame, and OpenCV

cmpGen

Last released

cmpGen is deprecated; it is maintained here for legacy purposes

metrics-manager

Last released

Generic system for defining, handling, storing, and loading metrics

render-d3-fdg

Last released

Render d3 force directed graphs from python

pyslices-ipynb-conversion

Last released

conversion functions between pyslices and ipynb files

mtm_stats

Last released

Highly efficient set statistics about many-to-many relationships

sparse_dot

Last released

Highly efficient set statistics about many-to-many relationships

EllipseFitter

Last released

find best fit ellipses of binary images

GifTiffLoader

Last released

automatically load multi-dimensional Tiff and Gif files and file sequences as numpy arrays using PIL

json_scheming

Last released

Tools to build pseudo-schemas from json (and nested lists of dicts)

mpl_utils

Last released

plotting utilites build around matplotlib

human_time_formatter

Last released

Human-readable time delta formatter with relative precision ("ndigits")

columnar_records

Last released

A dataframe-like object but simpler (basically a list of numpy arrays on steroids)

Cpyx

Last released

gcc/cython/distutils wrapper for compiling Cython and C code directly from python

wx_py

Last released

Py Suite including PyCrust and a revamped version, PySlices

coo_utils

Last released

utilities for managing nested lists of lists of scipy.sparse matrices

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