7 projects
fetchprotein
Fetch a protein 3D Structure / MSA / FASTA file from the PDB, UniProt or AlphaFold-DB (depending on the `protein_filename` extension).
ciftopdb
Convert an mmCIF ('.cif') 3D structure file to PDB ('.pdb') format.
structuredca
Structure-Informed Direct Couplings Analysis.
rsalor
Combines structural data (Relative Solvent Accessibility, RSA) and evolutionary data (Log Odd Ratio, LOR from MSA) to evaluate missense mutations in proteins.
pdb1topdb
Convert protien 3D structure BioUnit file ('.pdb1') to a standard 3D structure file ('.pdb').
littlecolors
A simple Python package to create, manipulate and mutate colors and color-scales.
littlecsv
Simple, light and little pip package to read, write and manage CSV files ('.csv') in Python.
