Pipeline for new epitope discovery.
Package for NoSQL variant data storage, annotation and prioritization.
This package is aimed at providing a way of retrieving variant information using ANNOVAR http://annovar.openbioinformatics.org/en/latest/ and myvariant.info. In particular, it issuited for bioinformaticians interested in aggregating variant information into a single database.The data structure used is a python dictionaty, so the data can be easily parsed to a MongoDBinstance.
This package is aimed at providing a way of retrieving epitope candidates from a vcf fileinstance.