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  mazzafish

  Joined on Jul 22, 2016

4 projects

VAPr

Last released on Nov 18, 2017

Package for NoSQL variant data storage, annotation and prioritization.

nepitope

Last released on Sep 8, 2016

Pipeline for new epitope discovery.

VarP

Last released on Aug 25, 2016

This package is aimed at providing a way of retrieving epitope candidates from a vcf fileinstance.

variantannotation

Last released on Aug 24, 2016

This package is aimed at providing a way of retrieving variant information using ANNOVAR http://annovar.openbioinformatics.org/en/latest/ and myvariant.info. In particular, it issuited for bioinformaticians interested in aggregating variant information into a single database.The data structure used is a python dictionaty, so the data can be easily parsed to a MongoDBinstance.

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