6 projects
simplesam
Simple pure Python SAM parser and objects for working with SAM records
pyfaidx
pyfaidx: efficient pythonic random access to fasta subsequences
fastqp
Simple NGS read quality assessment using Python
novartis-pisces
PISCES: pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries
hamstring
This python module generates, checks, and corrects quaternary Hamming barcodes.
strandex
Strand-anchored regex for expansion or contraction of FASTQ files
