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Medical Image Computing, German Cancer Research Center (DKFZ)

Username    mic-dkfz
Date joined   Joined

17 projects

mzarr

Last released

Mzarr (Multi-Resolution Zarr) is a Python library for working with the Mzarr image format

tqdmp

Last released

Multiprocessing with tqdm progressbars!

nnunetv2

Last released

nnU-Net is a framework for out-of-the box image segmentation.

dynamic-network-architectures

Last released

none

ParticleSeg3D

Last released

Scalable, out-of-the box segmentation of individual particles from mineral samples acquired with micro CT

patchly

Last released

A grid sampler for N-dimensional images

radtract

Last released

Radiomic Tractometry for advanced along-tract analysis of diffusion-weighted MRI

napari-mzarr

Last released

A reader and writer plugin for the Mzarr image format.

napari-sam

Last released

Segment anything with Meta AI's new SAM model!

napari-nifti

Last released

A napari plugin for reading and writing NIFTI files that have the extension .nii or .nii.gz.

cmdint

Last released

Enables detailed logging of command line calls in a very lightweight manner.

nnunet

Last released

nnU-Net. Framework for out-of-the box biomedical image segmentation.

batchgenerators

Last released

Data augmentation toolkit

acvl-utils

Last released

Super cool utilities that we just love to use

hd-glio

Last released

Tool for brain tumor segmentation. This is the result of a joint project between the Department of Neuroradiology at the Heidelberg University Hospital and the Division of Medical Image Computing at the German Cancer Research Center (DKFZ). See readme.md for more information

hd-gliomouse

Last released

Tool for brain tumor segmentation in mice. This is the result of a joint project between the Department of Neuroradiology at the Heidelberg University Hospital and the Division of Medical Image Computing at the German Cancer Research Center (DKFZ). See readme.md for more information

trixi

Last released

Manage your machine learning experiments with trixi - modular, reproducible, high fashion

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