3 projects
enact-SO
ENACT is a self-contained pipeline designed to streamline Visium HD analysis from cell segmentation to annotation, enabling integration with advanced spatial analysis tools.
celltypist-SO
A tool for semi-automatic cell type classification. This is a fork that removes leidenalg from the requirements.txt file to remove any GPL dependencies (igraph). All credit goes to original CellTypist authors (Chuan Xu et al.: cx1@sanger.ac.uk)
SpatialDE-SO
Spatial and Temporal DE test. This is a fork containing some bug fixes.
