11 projects
mossnet
A Python package for performing network analyses on MOSS results
niemafs
Niema's Python library for reading data from various file system standards
niemarkov
NieMarkov: Niema's Python implementation of Markov chains
treecluster
TreeCluster: a tool for clustering biological sequences using phylogenetic trees.
niemabf
NiemaBF: Niema's Python Bloom Filter implementation
CompactTree
CompactTree: Lightweight header-only C++ library for loading and traversing trees
treeswift
TreeSwift: Fast tree module for Python 2 and 3
niemads
NiemaDS: Non-standard data structures for Python 3
vireadb
ViReaDB: Viral Read Database
bgtools
bgtools: A Python package for managing playing board games
treesap
TreeSAP: Tree SAmpling under Phylogenetic models
