5 projects
gnomad-db
This package scales the huge gnomAD files to a SQLite database, which is easy and fast to query. It extracts from a gnomAD vcf the minor allele frequency for each variant.
mclustpy
Clustering using the mclust algorithm.
aestetik
AESTETIK: AutoEncoder for Spatial Transcriptomics Expression with Topology and Image Knowledge
xgbexcel
Convert XGBRegressor or XGBClassifier models to an Excel formula expression.
azimuthpy
Python wrapper for Azimuth (Seurat-based single-cell mapping) using rpy2
