10 projects
cooltools
Analysis tools for genomic interaction data stored in .cool format
pybbi
Python bindings to the UCSC source for Big Binary Indexed (bigWig/bigBed) files.
bioframe
Operations and utilities for Genomic Interval Dataframes.
pqdict
A Pythonic indexed priority queue.
oxbow
Read specialized bioinformatic file formats into dataframes.
higlass-python
Python bindings for HiGlass
cooler
Sparse binary format for genomic interaction matrices.
dask-ngs
Scalable access to bioinformatics data with Dask.
clodius
Tile generation for big data
svgpath2mpl
SVG path parser for matplotlib