higlass-python

Last released Apr 11, 2025

Python bindings for HiGlass

bioframe

Last released Apr 8, 2025

Operations and utilities for Genomic Interval Dataframes.

clodius

Last released Apr 7, 2025

Tile generation for big data

cooler

Last released Dec 21, 2024

Sparse binary format for genomic interaction matrices.

oxbow

Last released Dec 1, 2024

Read specialized bioinformatic file formats into dataframes.

pybbi

Last released Oct 18, 2024

Python bindings to the UCSC source for Big Binary Indexed (bigWig/bigBed) files.

assemblyinfo

Last released Jul 29, 2024

A Python library for working with harmonized genome metadata

cooltools

Last released Jul 1, 2024

Analysis tools for genomic interaction data stored in .cool format

ipylangchat

Last released Jun 27, 2024

Serverless chat UI Jupyter widget for langchain conversational AIs

pqdict

Last released Feb 13, 2024

A Pythonic indexed priority queue.

dask-ngs

Last released Jul 30, 2023

Scalable access to bioinformatics data with Dask.

svgpath2mpl

Last released Apr 26, 2021

SVG path parser for matplotlib