sdcflows

Last released Oct 15, 2021

Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes.

niworkflows

Last released Oct 15, 2021

NeuroImaging Workflows provides processing tools for magnetic resonance images of the brain.

fmriprep-docker

Last released Sep 22, 2021

A wrapper for generating Docker commands using regular fMRIPrep syntax

fmriprep

Last released Sep 22, 2021

fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data.

smriprep-docker

Last released Oct 8, 2021

A wrapper for generating Docker commands using regular sMRIPrep syntax

smriprep

Last released Oct 8, 2021

sMRIPrep (Structural MRI PREProcessing) pipeline

nirodents

Last released Oct 2, 2021

NeuroImaging Rodents (NiRodents) provides processing tools for magnetic resonance images of the rodent brain.

mriqc

Last released Sep 30, 2021

Automated Quality Control and visual reports for Quality Assesment of structural (T1w, T2w) and functional MRI of the brain.

nitransforms

Last released Sep 10, 2021

NiTransforms -- Neuroimaging spatial transforms in Python.

pydra

Last released Jun 18, 2021

Pydra dataflow engine

eddymotion

Last released Apr 12, 2021

Pure python eddy-current and head-motion correction for dMRI, an extension of QSIprep's SHOREline algorithm (Cieslak, 2020) to multiple diffusion models.

dmriprep

Last released Mar 11, 2021

dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data.

templateflow

Last released Dec 9, 2020

TemplateFlow Python Client - TemplateFlow is the Zone of neuroimaging templates.

gridbspline

Last released Aug 9, 2018

N-Dimensional, gridded, and multivariate data interpolation using splines

regseg

Last released Oct 14, 2017

Python interface to RegSeg, a surface-driven registration method for the structure-informed segmentation of multispectral brain images

diffantom

Last released Sep 26, 2016