21 projects
mriqc
Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain.
smriprep-docker
A wrapper for generating Docker commands using regular sMRIPrep syntax
smriprep
Structural MRI Preprocessing Pipelines
pydra
Pydra dataflow engine
templateflow
TemplateFlow Python Client - TemplateFlow is the Zone of neuroimaging templates.
niworkflows
NeuroImaging Workflows provides processing tools for magnetic resonance images of the brain.
fmriprep-docker
A wrapper for generating Docker commands using regular fMRIPrep syntax
fmriprep
A robust and easy-to-use pipeline for preprocessing of diverse fMRI data
sdcflows
Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes.
nibabies
Processing workflows for magnetic resonance images of the brain in infants
nipreps-versions
Version schemes for nipreps tools
nitransforms
NiTransforms -- Neuroimaging spatial transforms in Python.
nirodents
NeuroImaging Rodents (NiRodents) provides processing tools for magnetic resonance images of the rodent brain.
mriqc-learn
Learning on MRIQC-generated image quality metrics (IQMs).
niflow-nipype1-workflows
niflow-nipype1-workflows workflow package
eddymotion
Pure python eddy-current and head-motion correction for dMRI, an extension of QSIprep's SHOREline algorithm (Cieslak, 2020) to multiple diffusion models.
dmriprep
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data.
niflow-nipype1-examples
niflow-nipype1-examples workflow package
gridbspline
N-Dimensional, gridded, and multivariate data interpolation using splines
regseg
Python interface to RegSeg, a surface-driven registration method for the structure-informed segmentation of multispectral brain images
