End-to-end, segmentation-free analysis for image-based spatial transcriptomics (Xenium, Atera, CosMx, MERSCOPE): a Snakemake pipeline with a command line.
Kernel smoothing of transcript embeddings and a hierarchical Potts model of niches and domains for image-based spatial transcriptomics.
Anthropic, PBC
Visionary sponsor
Bloomberg
Visionary sponsor
Hudson River Trading
Visionary sponsor
Meta
Visionary sponsor
NVIDIA
Visionary sponsor
Microsoft
Sustainability sponsor
Depot
Continuous Integration
AWS
Cloud computing and Security Sponsor
Datadog
Monitoring
Fastly
CDN
Google
Download Analytics
Sentry
Error logging
StatusPage
Status page