4 projects
rbfe-network-map
Plan Relative Binding Free Energy perturbation networks from RDKit molecules
rdk-amber
Map AMBER/GAFF atom types to elements and load AMBER-style mol2 files into RDKit.
ligandparam
A ligand parameterization package for Amber
xyzrecover
Recover RDKit molecules, charges, SMILES, InChI, and InChIKey from XYZ coordinates with candidate charge inference.