Faster zlib and gzip compatible compression and decompression by providing python bindings for the ISA-L library.
Fast sequencing quality metrics
Read and write FASTA and FASTQ files efficiently
Open compressed files transparently
miniwdl slurm backend using singularity
Drop-in replacement for zlib and gzip modules using zlib-ng
A pytest plugin for configuring workflow/pipeline tests using YAML files
Convert SNP array to VCF
A fast FASTQ filter progam.
Compress your static website with gzip for faster serving with NGiNX's gzip_static on.
Converting various input formats into WDL structs for BioWDL pipelines.
Retrieve a column for each in a set of tables, placing them in a single output table.
Chunk and scatter the regions in a bed or sequence dict file
A pytest plugin for sending a desktop notification and playing a sound upon completion of tests
Creates a permanent cache for singularity images on disk.
Package a WDL and its imports into a zip file.
A tool for pulling singularity images in HPC environments.
Bioinformatics Test Data Generator
Splits FASTQ files evenly.