9 projects
galaxy-tool-refactor
Front-door metapackage for galaxy-tool-refactor: installs the CLI (and, with the [mcp] extra, the MCP server).
galaxy-tool-refactor-mcp
MCP server exposing the Galaxy tool refactoring facade to AI agents.
galaxy-tool-refactor-cli
Top-level CLI app that composes the Galaxy tool refactoring tiers (format + upgrade).
galaxy-tool-refactor-registry
Unified, code-addressable rule registry + named presets for the Galaxy tool refactoring tiers — tier 3.6, a library-first facade the CLI (and a future MCP server) compose.
galaxy-tool-lint
Advisory (detect-only) IUC best-practice checks for Galaxy tool XML — tier 3.5 of the galaxy-tool-source ecosystem.
galaxy-tool-fmt
Opinionated formatter for Galaxy tool XML — tier 3 of the galaxy-tool-source ecosystem.
galaxy-tool-codemod
Structural-refactor framework for Galaxy tool XML — tier 2 of the galaxy-tool-source ecosystem.
galaxy-tool-refactor-rules
Shared rule-metadata vocabulary for the galaxy-tool-refactor tiers (tier 0.5).
galaxy-tool-source
Foundation library for parsing, profile-aware validation, and typed inspection of Galaxy tool XML
