A collection of useful Python modules from the Application Scalability And Performance (ASAP) group at the National Center for Atmospheric Research
The ASAP Python Toolbox is a collection of stand-alone tools for doing simple tasks, from managing print messages with a set verbosity level, to keeping timing information, to managing simple MPI communication.
|AUTHORS:||Kevin Paul, John Dennis, Sheri Mickelson, Haiying Xu|
|COPYRIGHT:||2016, University Corporation for Atmospheric Research|
|LICENSE:||See the LICENSE.rst file for details|
Send questions and comments to Kevin Paul (firstname.lastname@example.org).
The ASAP (Application Scalability And Performance) group at the National Center for Atmospheric Research maintains this collection of simple Python tools for managing tasks commonly used with its Python software. The modules contained in this package include:
|vprinter:||For managing print messages with verbosity-level specification|
|timekeeper:||For managing multiple “stop watches” for timing metrics|
|partition:||For various data partitioning algorithms|
|simplecomm:||For simple MPI communication|
Only the simplecomm module depends on anything beyond the basic built-in Python packages.
All of the ASAP Python Toolbox are written to work with Python 2.6+ (including Python 3+). The vprinter, timekeeper, and partition modules are pure Python. The simplecomm module depends on mpi4py (>=1.3).
This implies the dependency:
- mpi4py depends on numpy (>-1.4) and MPI
The easiest way to install the ASAP Python Toolbox is from the Python Package Index (PyPI) with the pip package manager:
$ pip install [--user] ASAPTools
The optional ‘–user’ argument can be used to install the package in the local user’s directory, which is useful if the user doesn’t have root privileges.
Obtaining the Source Code
Currently, the most up-to-date source code is available via git from the site:
Check out the most recent tag. The source is available in read-only mode to everyone, but special permissions can be given to those to make changes to the source.
Building & Installation
Installation of the ASAP Python Toolbox is very simple. After checking out the source from the above svn link, via:
$ git clone https://github.com/NCAR/ASAPPyTools
change into the top-level source directory, check out the most recent tag, and run the Python distutils setup. On unix, this involves:
$ cd ASAPPyTools $ python setup.py install [--prefix-/path/to/install/location]
The prefix is optional, as the default prefix is typically /usr/local on linux machines. However, you must have permissions to write to the prefix location, so you may want to choose a prefix location where you have write permissions. Like most distutils installations, you can alternatively install the pyTools with the –user option, which will automatically select (and create if it does not exist) the $HOME/.local directory in which to install. To do this, type (on unix machines):
$ python setup.py install --user
This can be handy since the site-packages directory will be common for all user installs, and therefore only needs to be added to the PYTHONPATH once.
To build the documentation for developer use, you will need Sphinx. Sphinx can be installed with the pip utility simple:
$ pip install Sphinx
Once Sphinx is installed, you can build the ASAP Python Toolbox’s HTML documentation with:
$ cd docs $ make html
which will build the documentation in the docs/build/html directory. If you wish to build a PDF, do the following:
$ cd docs $ make latexpdf
which requires pdflatex to build a PDF version of the documentation.
Before Using the ASAP Python Toolbox
Before the ASAP Python Toolbox package can be used, you must make sure that the site-packages directory containing the ‘pytools’ source directory is in your PYTHONPATH. Depending on the PREFIX used during installation, this path will be:
where X will be 6 or 7 (or other) depending on the version of Python that you are using to install the package.
Instructions & Use
For instructions on how to use the ASAP Python Toolbox, see the additional documentation found in the docs directory. Please read the ‘Building & Installation’ section above for instructions on how to build the HTML documentation. Once built, you will be able to open the ‘docs/build/html/index.html’ page in any browser.