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Automatic Cell Detection for Microscopic Images

Project description

Automatic Cell Detection

AutoCellDetect is a library for automatically identifying and characterizing cells for microscopic or AFM images.

Key Features

  • Automatically detects cells in an image or cells next to red labels
  • Annotate and save image file with identified cells
  • Find cell characteristics: center, average diameter, perimeter, area, aspect ratio, circularity, cell intensity etc
  • Outputs cell characteristics on an excel file
  • Find resize factor based on an image

Installation

Use package manager pip to install

pip install autoCellDetect

Project details


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