CHESS analysis pipeline framework
Project description
ChessAnalysisPipeline (CHAP)
CHAP is a package that provides a framework for executing data anlaysis pipelines. The package can be found on PyPI and conda-forge.
Subpackages
There are several subpackages within CHAP that contain specialized items to handle specific types of data processing in the CHAP framework. Dependencies for these subpackages can be found in CHAP/<subpackage_name>/environment.yml.
Documentation
Documentation for the latest version can be found on this project's github pages site.
Galaxy
The galaxy-tools/ directory contains a set of CHAP-based tools for use in the Galaxy science gateway.
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