DendroPy is a Python library for phylogenetic computing. It provides classes and functions for the simulation, processing, and manipulation of phylogenetic trees and character matrices, and supports the reading and writing of phylogenetic data in a range of formats, such as NEXUS, NEWICK, NeXML, Phylip, FASTA, etc. Application scripts for performing some useful phylogenetic operations, such as data conversion and tree posterior distribution summarization, are also distributed and installed as part of the libary. DendroPy can thus function as a stand-alone library for phylogenetics, a component of more complex multi-library phyloinformatic pipelines, or as a scripting “glue” that assembles and drives such pipelines.
The primary home page for DendroPy, with detailed tutorials and documentation, is at:
DendroPy is also hosted in the official Python repository:
Requirements and Installation
DendroPy 4.x runs under Python 3 (all versions > 3.1) and Python 2 (Python 2.7 only).
You can install DendroPy by running:
$ sudo pip install dendropy
More information is available here:
Documentation
Full documentation is available here:
This includes:
and more.
License and Warranty
Please see the file “LICENSE.rst” for details.
Current Release
The current release of DendroPy-calver is version 2023.330.2.
1 maintainer
Metadata
1 maintainer
Release files for DendroPy-calver 2023.330.2
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| DendroPy-calver-2023.330.2.tar.gz | 15.2 MB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| DendroPy_calver-2023.330.2-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 15.7 MB
Release files / DendroPy-calver-2023.330.2.tar.gz
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| Size | 15.2 MB |
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Release files / DendroPy_calver-2023.330.2-py3-none-any.whl
| Download URL | DendroPy_calver-2023.330.2-py3-none-any.whl |
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