Skip to main content

Preparation package for molecular docking

Project description

DockForge

A Python package for preparing proteins and ligands for molecular docking.
Includes: hydrogen addition, charge assignment, format conversion, cleanup.

Requirements

Requires Open Babel to be installed separately. Install via:
brew install open-babel or conda install -c conda-forge openbabel
See Open Babel installation instructions.

Also requires PDBfixer. Install via:
conda install -c conda-forge pdbfixer

Project details


Release history Release notifications | RSS feed

This version

1.0

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

dockforge-1.0.tar.gz (14.7 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

dockforge-1.0-py3-none-any.whl (13.8 kB view details)

Uploaded Python 3

File details

Details for the file dockforge-1.0.tar.gz.

File metadata

  • Download URL: dockforge-1.0.tar.gz
  • Upload date:
  • Size: 14.7 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.1.0 CPython/3.10.18

File hashes

Hashes for dockforge-1.0.tar.gz
Algorithm Hash digest
SHA256 c7a1d26ec77232428d593f8094bf0c863bfd6649494ee17b270168477d02ada6
MD5 4c3fb3fdcc1dc0fed529232054a0efd9
BLAKE2b-256 ed454256e9021b956079e21dfecd2c6f344be9b559cefe634aff2376542c258f

See more details on using hashes here.

File details

Details for the file dockforge-1.0-py3-none-any.whl.

File metadata

  • Download URL: dockforge-1.0-py3-none-any.whl
  • Upload date:
  • Size: 13.8 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.1.0 CPython/3.10.18

File hashes

Hashes for dockforge-1.0-py3-none-any.whl
Algorithm Hash digest
SHA256 bbaa260d33b0b28205a09f82f685a7aeeee64ff15cdd6299b5e94595ed35894c
MD5 4d56491878eb7984e4604cafa4f56222
BLAKE2b-256 35536b26a26b80561c53681e6157a0a72c5e1c6650516609830ae9b6aa19e9d5

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page