Skip to main content
This is a pre-production deployment of Warehouse. Changes made here affect the production instance of PyPI (pypi.python.org).
Help us improve Python packaging - Donate today!

Flow Cytometry Calibration Library

Project Description

FlowCal is a library for processing and analyzing flow cytometry data in Python. It features:

  • Extraction of Flow Cytometry Standard (FCS) files into numpy array-like structures
  • Traditional and non-standard gating, including automatic density-based two-dimensional gating.
  • Traditional transformation functions, such as exponentiation.
  • Analysis of calibration beads data, standard curve generation, and transformation to absolute units (Molecules of Equivalent Fluorophore, MEF).
  • Plotting, including generation of histograms, density plots and scatter plots.
  • A user-fiendly Excel UI to gate, transform, plot, and generate statistics from a list of flow cytometry samples in a simple fashion.

Documentation

The official documentation can be found in http://taborlab.github.io/FlowCal/. Here you will find installation instructions, tutorials, and more.

Report Bugs

The official way to report a bug is through the issue tracker on github (https://github.com/taborlab/FlowCal/issues). Try to be as explicit as possible when describing your issue. Ideally, a set of instructions to reproduce the error should be provided, together with the version of all the relevant packages you are using.

Request Features

Features can also be requested through the issue tracker on github. Try to be as descriptive as possible about the desired feature.

Release History

Release History

This version
History Node

1.1.4

History Node

1.1.3

History Node

1.1.2

History Node

1.1.1

History Node

1.1.0

History Node

1.0.0

History Node

1.0.0b2

Download Files

Download Files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

File Name & Checksum SHA256 Checksum Help Version File Type Upload Date
FlowCal-1.1.4.tar.gz (62.4 kB) Copy SHA256 Checksum SHA256 Source Jun 13, 2017

Supported By

WebFaction WebFaction Technical Writing Elastic Elastic Search Pingdom Pingdom Monitoring Dyn Dyn DNS Sentry Sentry Error Logging CloudAMQP CloudAMQP RabbitMQ Heroku Heroku PaaS Kabu Creative Kabu Creative UX & Design Fastly Fastly CDN DigiCert DigiCert EV Certificate Rackspace Rackspace Cloud Servers DreamHost DreamHost Log Hosting