DNase I seq QC pipeline
Project description
GCAP is a python module for wrapping different tools to quality control DNase-seq and other open chromatin sequencing data.
GCAP is easy to start
GCAP -i "test_pair2.fastq,test_pair1.fastq;test_pair2.fastq,test_pair1.fastq" -n test -o test -s hg19 --pe --threads 18We suggest using virtualenv to avoid python version library conflicts.
Links
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
GCAP-1.1-20140805.tar.gz
(24.8 kB
view details)
File details
Details for the file GCAP-1.1-20140805.tar.gz.
File metadata
- Download URL: GCAP-1.1-20140805.tar.gz
- Upload date:
- Size: 24.8 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
597ca131738abffe9beea306c20dc0e982e02eca8848407bf334e2f73332f46a
|
|
| MD5 |
93299a806190ddd2fc671b7841f90f6d
|
|
| BLAKE2b-256 |
52ca5e48f7dede15967e2a081421d52b68044f8434b43f93251fff6b8d827d19
|
